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Reproducible Research in the Humanities

Notes for the DH Oxford Summer School

References

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Force11, 2016. The FAIR data principles, https://www.force11.org/group/fairgroup/fairprinciples

Hong, Neil P. Chue, Tom Crick, Ian P. Gent, Lars Kotthoff, and Kenji Takeda. “Top Tips to Make Your Research Irreproducible.” ArXiv://1504.00062 [Cs], March 31, 2015. http://arxiv.org/abs/1504.00062.

Huang, Daisie and Gonzalez, Ivan (eds): “Software Carpentry: Version Control with Git.” Version 2016.06, June 2016, https://github.com/swcarpentry/git-novice, 10.5281zenodo.57467

Jackson, Mike, How to cite and describe the software you used in your research - top ten tips, https://www.software.ac.uk/blog/2016-10-07-how-cite-and-describe-software-you-used-your-research-top-ten-tips

Lowndes, J.S.S. et al. Our path to better science in less time using open data science tools. Nat. Ecol. Evol. 1, 0160 (2017), doi://10.1038s41559-017-0160

Morin Andrew, Urban Jennifer, Sliz Piotr , A Quick Guide to Software Licensing for the Scientist-Programmer, PLOS Computation Biology, https://doi.org/10.1371/journal.pcbi.1002598

Piccolo, Stephen R., and Michael B. Frampton. “Tools and Techniques for Computational Reproducibility.” GigaScience 5, no. 1 (December 1, 2016): 1–13. doi://10.1186s13742-016-0135-4.

Rule, A., Birmingham, A., Zuniga, C., Altintas, I., Huang, S.C., Knight, R., Moshiri, N., Nguyen, M.H., Rosenthal, S.B., Pérez, F. and Rose, P.W., 2018. Ten simple rules for reproducible research in Jupyter notebooks. arXiv preprint arXiv:1810.08055.

Usher, Will, How Not to Cite Software (and how to be cited), https://www.software.ac.uk/blog/2017-03-30-how-not-cite-software-and-how-be-cited

Wilson, G., Aruliah, D.A., Brown, C.T., Hong, N.P.C., Davis, M., Guy, R.T., Haddock, S.H., Huff, K.D., Mitchell, I.M., Plumbley, M.D. and Waugh, B., 2014. Best practices for scientific computing. PLoS biology, 12(1), p.e1001745.

Wilson, G., Bryan, J., Cranston, K., Kitzes, J., Nederbragt, L. and Teal, T.K., 2017. Good enough practices in scientific computing. PLoS computational biology, 13(6), p.e1005510.